File:Hopf bifurcation, with limit cycle up to order 3-2..gif

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Summary

Description
English: ```python

from tqdm import tqdm import numpy as np import matplotlib.pyplot as plt from scipy.integrate import solve_ivp import os

escape_size = 2.0 # If a trajectory is this distance away from 0, we assume it has escaped and stop simulating it. max_mu = 0.22 mu_resolution = 120 mus = np.linspace(0.001, max_mu, mu_resolution) ** 2 for i, mu in enumerate(tqdm(mus)):

 fig, ax = plt.subplots(figsize=(16,16))
 def system(t, y):
     v, w = y
     dv = mu * v + w - v**2
     dw = -v + mu * w + 2 * v**2
     dv *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     dw *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     return [dv, dw]
 def system_reversed(t, y):
     v, w = y
     dv = mu * v + w - v**2
     dw = -v + mu * w + 2 * v**2
     dv *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     dw *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     return [-dv, -dw]
 x_root = (mu**2+1)/(2+mu)
 y_root = -mu * x_root + x_root ** 2
 vmin, vmax, wmin, wmax = -0.4,0.4,-0.4,0.4
 # Hopf bifurcation circle
 if mu > 0:
     thetas = np.linspace(0, 2*np.pi, 1000)
     xs = np.sqrt(2*mu) * np.cos(thetas)
     ys = -np.sqrt(2*mu) * np.sin(thetas)
     ax.plot(xs, ys, color='r', linewidth=1, label="$\mu^{1/2}$ order")  
     xs += mu * (2-2/3 * np.sin(2*thetas)-2/3 * np.cos(2*thetas))
     ys += mu * (1+4/3*np.sin(2*thetas) - 1/3*np.cos(2*thetas))
     ax.plot(xs, ys, color='b', linewidth=1, label="$\mu$ order")  
     xs += mu**1.5 / np.sqrt(72) * (5 * np.sin(3*thetas) - np.cos(3*thetas))
     ys += mu**1.5 / np.sqrt(72) * (36 * np.sin(thetas) + 28 * np.cos(thetas) - 5 * np.sin(3*thetas) + 7 * np.cos(3*thetas))
     ax.plot(xs, ys, color='k', linewidth=1, label="$\mu^{3/2}$ order")  
     radius = xs[0]
 t_span = np.array([0, 14])
 trajectory_resolution = 10
 epsilon = 0.01
 initial_conditions = []
 initial_conditions += [(x, 0)  for x in np.linspace(vmin, vmax, trajectory_resolution)]
 initial_conditions_2 = []
 if mu > 0:
   initial_conditions_2 = [(radius *(1 + dx), 0) for dx in np.linspace(-0.08, 0.08, 5)]
 sols = {}
 sols_2 = {}
 for ic in initial_conditions:
     sols[ic] = solve_ivp(system, [0,50], ic, dense_output=True, max_step=0.05)
 for ic in initial_conditions_2:
     sols_2[ic] = solve_ivp(system, [0, min(0.1 * t_span[1]/mu, 200)], ic, dense_output=True, max_step=0.05)
 vs = np.linspace(vmin, vmax, 200)
 v_axis = np.linspace(vmin, vmax, 20)
 w_axis = np.linspace(wmin, wmax, 20)


 v_values, w_values = np.meshgrid(v_axis, w_axis)
 dv, dw = system(0, [v_values, w_values])
 # integral curves
 # ax.scatter([x for x, y in initial_conditions_2], [y for x, y in initial_conditions_2])
 for ic in initial_conditions:
   sol = sols[ic]
   ax.plot(sol.y[0], sol.y[1],alpha=0.2, linewidth=0.5, color='k')
 for ic in initial_conditions_2:
   sol = sols_2[ic]
   ax.plot(sol.y[0], sol.y[1],alpha=0.3, linewidth=0.5, color='g')
 # vector fields
 arrow_lengths = np.sqrt(dv**2 + dw**2)
 alpha_values = 1 - (arrow_lengths / np.max(arrow_lengths))**0.4
 ax.quiver(v_values, w_values, dv, dw, color='blue', linewidth=0.5, scale=25, alpha=alpha_values)
ax.set_title(f'Hopf Bifurcation Model\n$\mu={mu:.4f
})
 # ax.legend()
 ax.set_xlim(vmin, vmax)
 ax.set_ylim(wmin, wmax)
 ax.legend(loc='lower left')
 # ax.set_xticks([])
 # ax.set_yticks([])
 dir_path = f"./hopf_3"
 if not os.path.exists(dir_path):
   os.makedirs(dir_path)
 fig.savefig(f"{dir_path}/{i}.png")
 # plt.show()
 plt.close()

import imageio.v3 as iio from natsort import natsorted import moviepy.editor as mp

for dir_path in ["./hopf_3"]:

   file_names = natsorted((fn for fn in os.listdir(dir_path) if fn.endswith('.png')))
   # Create a list of image files and set the frame rate
   images = []
   fps = 12
   # Iterate over the file names and append the images to the list
   for file_name in file_names:
       file_path = os.path.join(dir_path, file_name)
       images.append(iio.imread(file_path))
   filename = dir_path[2:]
   iio.imwrite(f"{filename}.gif", images, duration=1000/fps, rewind=True)
   clip = mp.ImageSequenceClip(images, fps=fps)
   clip.write_videofile(f"{filename}.mp4")
```
Source Own work Edit this at Structured Data on Commons
Author

|date=2023-04-26 |source=Own work |author=Cosmia Nebula }}

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Date/TimeThumbnailDimensionsUserComment
current07:00, 27 April 2023Thumbnail for version as of 07:00, 27 April 20231,600 × 1,600 (12.09 MB)Cosmia NebulaUploaded while editing "Hopf bifurcation" on en.wikipedia.org
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