Jump to content

Phosphopantothenate—cysteine ligase

From Wikipedia, the free encyclopedia
(Redirected from PPCS (gene))
Phosphopantothenate—cysteine ligase
Identifiers
EC no.6.3.2.5
CAS no.9023-50-1
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Gene OntologyAmiGO / QuickGO
Search
PMCarticles
PubMedarticles
NCBIproteins

In enzymology, a phosphopantothenate—cysteine ligase also known as phosphopantothenoylcysteine synthetase (PPCS) is an enzyme (EC 6.3.2.5) that catalyzes the chemical reaction which constitutes the second of five steps involved in the conversion of pantothenate to Coenzyme A. The reaction is:

NTP + (R)-4'-phosphopantothenate + L-cysteine NMP + diphosphate + N-[(R)-4'-phosphopantothenoyl]-L-cysteine

The nucleoside triphosphate (NTP) involved in the reaction varies from species to species. Phosphopantothenate—cysteine ligase from the bacterium Escherichia coli uses cytidine triphosphate (CTP) as an energy donor, whilst the human isoform uses adenosine triphosphate (ATP).[1]

Nomenclature

[edit]

This enzyme belongs to the family of ligases, specifically those forming carbon-nitrogen bonds as acid-D-amino-acid ligases (peptide syntheses). The systematic name of this enzyme class is (R)-4'-phosphopantothenate:L-cysteine ligase. This enzyme is also called phosphopantothenoylcysteine synthetase.

Gene

[edit]
PPCS
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesPPCS, Phosphopantothenate—cysteine ligase, phosphopantothenoylcysteine synthetase, CMD2C
External IDsOMIM: 609853; MGI: 1915237; HomoloGene: 6173; GeneCards: PPCS; OMA:PPCS - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_026494
NM_001355214

RefSeq (protein)

NP_080770
NP_001342143

Location (UCSC)Chr 1: 42.46 – 42.47 MbChr 4: 119.28 – 119.28 Mb
PubMed search[4][5]
Wikidata
View/Edit HumanView/Edit Mouse

Phosphopantothenoylcysteine synthetase in humans is encoded by the PPCS gene.[6]

Protein structure

[edit]

As of late 2007, 5 structures have been solved for this class of enzymes, with PDB accession codes 1P9O, 1U7U, 1U7W, 1U7Z, and 1U80.

References

[edit]
  1. ^ Manoj N, Strauss E, Begley TP, Ealick SE (Aug 2003). "Structure of human phosphopantothenoylcysteine synthetase at 2.3 A resolution". Structure. 11 (8): 927–936. doi:10.1016/S0969-2126(03)00146-1. PMID 12906824.
  2. ^ a b c GRCh38: Ensembl release 89: ENSG00000127125Ensembl, May 2017
  3. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028636Ensembl, May 2017
  4. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  6. ^ "Entrez Gene: Phosphopantothenoylcysteine synthetase".

Further reading

[edit]
[edit]
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human Phosphopantothenate—cysteine ligase