User:ProteinBoxBot/PBB Log Wiki 11-24-2007-GPCR-D-11

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Log file for Protein Box Bot[edit]

Log page index: User:ProteinBoxBot/PBB_Log_Index

Protein Status Quick Log - Date: 18:53, 27 November 2007 (UTC)[edit]

Proteins without matches (4)[edit]

OR2I1P OR5U1 OR10C1 OR2A2

Manual Inspection (Page not found) (4)[edit]

OR2I1P OR5U1 OR10C1 OR2A2


Protein Status Grid - Date: 18:53, 27 November 2007 (UTC)[edit]

HUGO Symbol Action Summary Target page(s) WP Symbol Search
OR2I1P Manual Inspection (Page not found) Other Pages: Olfactory receptor (Unknown Data); OR2I1P (No Data); OR6-1 (No Data); Or6-1 (No Data); HS6M1-14 (No Data); Hs6m1-14 (No Data); OR2I1 (No Data); Or2i1 (No Data); OR2I2 (No Data); Or2i2 (No Data); OR2I3P (No Data); Or2i3p (No Data); OR2I4P (No Data); Or2i4p (No Data); OR2I5P (No Data); Or2i5p (No Data); OR2I6 (No Data); Or2i6 (No Data); OR2I7P (No Data); Or2i7p (No Data); OR2I8P (No Data); Or2i8p (No Data); OR2I9P (No Data); Or2i9p (No Data); OR6-34 (No Data); Or6-34 (No Data); [1]
OR5U1 Manual Inspection (Page not found) Other Pages: Olfactory receptor (Unknown Data); OR5U1 (No Data); OR6-25 (No Data); Or6-25 (No Data); BA150A6.4 (No Data); Ba150a6.4 (No Data); Hs6M1-28 (No Data); Hs6m1-28 (No Data); [2]
OR10C1 Manual Inspection (Page not found) Other Pages: Olfactory receptor (Unknown Data); OR10C1 (No Data); OR6-31 (No Data); Or6-31 (No Data); OR10C1P (No Data); Or10c1p (No Data); OR10C2 (No Data); Or10c2 (No Data); Hs6M1-17 (No Data); Hs6m1-17 (No Data); [3]
OR2A2 Manual Inspection (Page not found) Other Pages: Olfactory receptor (Unknown Data); OR2A2 (No Data); OR2A17P (No Data); Or2a17p (No Data); OR2A2P (No Data); Or2a2p (No Data); OR7-11 (No Data); Or7-11 (No Data); OST008 (No Data); Ost008 (No Data); [4]

Vebose Log - Date: 18:53, 27 November 2007 (UTC)[edit]

OR10C1[edit]

  • INFO: Beginning work on OR10C1... {November 27, 2007 10:50:48 AM PST}
  • AMBIGUITY: Did not locate an acceptable page to update. {November 27, 2007 10:51:40 AM PST} 
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image =  
 | image_source =  
 | PDB = 
 | Name = Olfactory receptor, family 10, subfamily C, member 1
 | HGNCid = 8165
 | Symbol = OR10C1
 | AltSymbols =; OR6-31; OR10C1P; OR10C2; hs6M1-17
 | OMIM =  
 | ECnumber =  
 | Homologene = 71990
 | MGIid = 2177478
 | GeneAtlas_image1 = PBB_GE_OR10C1_221339_at_tn.png
 | Function = {{GNF_GO|id=GO:0004872 |text = receptor activity}} {{GNF_GO|id=GO:0004984 |text = olfactory receptor activity}} 
 | Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}} 
 | Process = {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007186 |text = G-protein coupled receptor protein signaling pathway}} {{GNF_GO|id=GO:0007608 |text = sensory perception of smell}} {{GNF_GO|id=GO:0050896 |text = response to stimulus}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 442194
    | Hs_Ensembl = ENSG00000204689
    | Hs_RefseqProtein = NP_039229
    | Hs_RefseqmRNA = NM_013941
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr = 6
    | Hs_GenLoc_start = 29515062
    | Hs_GenLoc_end = 29516710
    | Hs_Uniprot = Q96KK4
    | Mm_EntrezGene = 258506
    | Mm_Ensembl = ENSMUSG00000049561
    | Mm_RefseqmRNA = NM_146513
    | Mm_RefseqProtein = NP_666724
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 17
    | Mm_GenLoc_start = 36818966
    | Mm_GenLoc_end = 36819904
    | Mm_Uniprot =  
  }}
}}
'''Olfactory receptor, family 10, subfamily C, member 1''', also known as '''OR10C1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: OR10C1 olfactory receptor, family 10, subfamily C, member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442194| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms.<ref name="entrez">{{cite web | title = Entrez Gene: OR10C1 olfactory receptor, family 10, subfamily C, member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442194| accessdate = }}</ref>
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Fuchs T, Malecova B, Linhart C, ''et al.'' |title=DEFOG: a practical scheme for deciphering families of genes. |journal=Genomics |volume=80 |issue= 3 |pages= 295-302 |year= 2003 |pmid= 12213199 |doi=  }}
*{{cite journal  | author=Volz A, Ehlers A, Younger R, ''et al.'' |title=Complex transcription and splicing of odorant receptor genes. |journal=J. Biol. Chem. |volume=278 |issue= 22 |pages= 19691-701 |year= 2003 |pmid= 12637542 |doi= 10.1074/jbc.M212424200 }}
*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal  | author=Malnic B, Godfrey PA, Buck LB |title=The human olfactory receptor gene family. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 8 |pages= 2584-9 |year= 2004 |pmid= 14983052 |doi=  }}
}}
{{refend}}

{{protein-stub}}

OR2A2[edit]

  • INFO: Beginning work on OR2A2... {November 27, 2007 10:52:31 AM PST}
  • AMBIGUITY: Did not locate an acceptable page to update. {November 27, 2007 10:52:56 AM PST} 
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image =  
 | image_source =  
 | PDB = 
 | Name = Olfactory receptor, family 2, subfamily A, member 2
 | HGNCid = 8230
 | Symbol = OR2A2
 | AltSymbols =; OR2A17P; OR2A2P; OR7-11; OST008
 | OMIM =  
 | ECnumber =  
 | Homologene = 88438
 | MGIid = 3030275
 | Function = {{GNF_GO|id=GO:0004872 |text = receptor activity}} {{GNF_GO|id=GO:0004984 |text = olfactory receptor activity}} 
 | Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}} 
 | Process = {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007186 |text = G-protein coupled receptor protein signaling pathway}} {{GNF_GO|id=GO:0007608 |text = sensory perception of smell}} {{GNF_GO|id=GO:0050896 |text = response to stimulus}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 442361
    | Hs_Ensembl =  
    | Hs_RefseqProtein = NP_001005480
    | Hs_RefseqmRNA = NM_001005480
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr =  
    | Hs_GenLoc_start =  
    | Hs_GenLoc_end =  
    | Hs_Uniprot =  
    | Mm_EntrezGene = 258649
    | Mm_Ensembl = ENSMUSG00000073109
    | Mm_RefseqmRNA = NM_146655
    | Mm_RefseqProtein = NP_666866
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 6
    | Mm_GenLoc_start = 43045351
    | Mm_GenLoc_end = 43046283
    | Mm_Uniprot =  
  }}
}}
'''Olfactory receptor, family 2, subfamily A, member 2''', also known as '''OR2A2''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: OR2A2 olfactory receptor, family 2, subfamily A, member 2| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442361| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms.<ref name="entrez">{{cite web | title = Entrez Gene: OR2A2 olfactory receptor, family 2, subfamily A, member 2| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442361| accessdate = }}</ref>
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Fuchs T, Malecova B, Linhart C, ''et al.'' |title=DEFOG: a practical scheme for deciphering families of genes. |journal=Genomics |volume=80 |issue= 3 |pages= 295-302 |year= 2003 |pmid= 12213199 |doi=  }}
*{{cite journal  | author=Hillier LW, Fulton RS, Fulton LA, ''et al.'' |title=The DNA sequence of human chromosome 7. |journal=Nature |volume=424 |issue= 6945 |pages= 157-64 |year= 2003 |pmid= 12853948 |doi= 10.1038/nature01782 }}
*{{cite journal  | author=Malnic B, Godfrey PA, Buck LB |title=The human olfactory receptor gene family. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 8 |pages= 2584-9 |year= 2004 |pmid= 14983052 |doi=  }}
}}
{{refend}}

{{protein-stub}}

OR2I1P[edit]

  • INFO: Beginning work on OR2I1P... {November 27, 2007 10:51:40 AM PST}
  • AMBIGUITY: Did not locate an acceptable page to update. {November 27, 2007 10:52:31 AM PST} 
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image =  
 | image_source =  
 | PDB = 
 | Name = Olfactory receptor, family 2, subfamily I, member 1 pseudogene
 | HGNCid = 8258
 | Symbol = OR2I1P
 | AltSymbols =; OR6-1; HS6M1-14; OR2I1; OR2I2; OR2I3P; OR2I4P; OR2I5P; OR2I6; OR2I7P; OR2I8P; OR2I9P; OR6-34
 | OMIM =  
 | ECnumber =  
 | Homologene =  
 | MGIid =  
 | Function = {{GNF_GO|id=GO:0004872 |text = receptor activity}} {{GNF_GO|id=GO:0004984 |text = olfactory receptor activity}} 
 | Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}} 
 | Process = {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007186 |text = G-protein coupled receptor protein signaling pathway}} {{GNF_GO|id=GO:0007608 |text = sensory perception of smell}} {{GNF_GO|id=GO:0050896 |text = response to stimulus}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 442197
    | Hs_Ensembl =  
    | Hs_RefseqProtein =  
    | Hs_RefseqmRNA =  
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr =  
    | Hs_GenLoc_start =  
    | Hs_GenLoc_end =  
    | Hs_Uniprot =  
    | Mm_EntrezGene =  
    | Mm_Ensembl =  
    | Mm_RefseqmRNA =  
    | Mm_RefseqProtein =  
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr =  
    | Mm_GenLoc_start =  
    | Mm_GenLoc_end =  
    | Mm_Uniprot =  
  }}
}}
'''Olfactory receptor, family 2, subfamily I, member 1 pseudogene''', also known as '''OR2I1P''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: OR2I1P olfactory receptor, family 2, subfamily I, member 1 pseudogene| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442197| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms.<ref name="entrez">{{cite web | title = Entrez Gene: OR2I1P olfactory receptor, family 2, subfamily I, member 1 pseudogene| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442197| accessdate = }}</ref>
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Malnic B, Godfrey PA, Buck LB |title=The human olfactory receptor gene family. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 8 |pages= 2584-9 |year= 2004 |pmid= 14983052 |doi=  }}
}}
{{refend}}

{{protein-stub}}

OR5U1[edit]

  • INFO: Beginning work on OR5U1... {November 27, 2007 10:50:23 AM PST}
  • AMBIGUITY: Did not locate an acceptable page to update. {November 27, 2007 10:50:48 AM PST} 
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image =  
 | image_source =  
 | PDB = 
 | Name = Olfactory receptor, family 5, subfamily U, member 1
 | HGNCid = 13971
 | Symbol = OR5U1
 | AltSymbols =; OR6-25; bA150A6.4; hs6M1-28
 | OMIM =  
 | ECnumber =  
 | Homologene = 71957
 | MGIid = 2177508
 | Function = {{GNF_GO|id=GO:0004872 |text = receptor activity}} {{GNF_GO|id=GO:0004984 |text = olfactory receptor activity}} 
 | Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}} 
 | Process = {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007186 |text = G-protein coupled receptor protein signaling pathway}} {{GNF_GO|id=GO:0007608 |text = sensory perception of smell}} {{GNF_GO|id=GO:0050896 |text = response to stimulus}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 442191
    | Hs_Ensembl = ENSG00000112459
    | Hs_RefseqProtein = NP_112208
    | Hs_RefseqmRNA = NM_030946
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr = c6_COX
    | Hs_GenLoc_start = 29418436
    | Hs_GenLoc_end = 29419401
    | Hs_Uniprot = Q9UGF5
    | Mm_EntrezGene = 258287
    | Mm_Ensembl = ENSMUSG00000050613
    | Mm_RefseqmRNA = NM_146290
    | Mm_RefseqProtein = NP_666402
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 17
    | Mm_GenLoc_start = 37443054
    | Mm_GenLoc_end = 37444016
    | Mm_Uniprot =  
  }}
}}
'''Olfactory receptor, family 5, subfamily U, member 1''', also known as '''OR5U1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: OR5U1 olfactory receptor, family 5, subfamily U, member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442191| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms.<ref name="entrez">{{cite web | title = Entrez Gene: OR5U1 olfactory receptor, family 5, subfamily U, member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=442191| accessdate = }}</ref>
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal  | author=Malnic B, Godfrey PA, Buck LB |title=The human olfactory receptor gene family. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 8 |pages= 2584-9 |year= 2004 |pmid= 14983052 |doi=  }}
}}
{{refend}}

{{protein-stub}}

end log.

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