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RFXAP

From Wikipedia, the free encyclopedia
RFXAP
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesRFXAP, regulatory factor X associated protein
External IDsOMIM: 601861; MGI: 2180854; HomoloGene: 452; GeneCards: RFXAP; OMA:RFXAP - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_000538

NM_133231

RefSeq (protein)

NP_000529

NP_573494

Location (UCSC)Chr 13: 36.82 – 36.83 MbChr 3: 54.71 – 54.72 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Regulatory factor X-associated protein is a protein that in humans is encoded by the RFXAP gene.[5][6]

Major histocompatibility (MHC) class II molecules are transmembrane proteins that have a central role in development and control of the immune system. The protein encoded by this gene, along with regulatory factor X-associated ankyrin-containing protein and regulatory factor-5, forms a complex that binds to the X box motif of certain MHC class II gene promoters and activates their transcription. Once bound to the promoter, this complex associates with the non-DNA-binding factor MHC class II transactivator, which controls the cell type specificity and inducibility of MHC class II gene expression. Mutations in this gene have been linked to bare lymphocyte syndrome type II, complementation group D. Transcript variants utilizing different polyA signals have been found for this gene.[6]

Interactions

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RFXAP has been shown to interact with RFXANK.[7][8]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000133111Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036615Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Durand B, Sperisen P, Emery P, Barras E, Zufferey M, Mach B, Reith W (April 1997). "RFXAP, a novel subunit of the RFX DNA binding complex is mutated in MHC class II deficiency". EMBO J. 16 (5): 1045–55. doi:10.1093/emboj/16.5.1045. PMC 1169704. PMID 9118943.
  6. ^ a b "Entrez Gene: RFXAP regulatory factor X-associated protein".
  7. ^ Nekrep, N; Geyer M; Jabrane-Ferrat N; Peterlin B M (August 2001). "Analysis of ankyrin repeats reveals how a single point mutation in RFXANK results in bare lymphocyte syndrome". Mol. Cell. Biol. 21 (16). United States: 5566–76. doi:10.1128/MCB.21.16.5566-5576.2001. ISSN 0270-7306. PMC 87278. PMID 11463838.
  8. ^ Nekrep, N; Jabrane-Ferrat N; Peterlin B M (June 2000). "Mutations in the bare lymphocyte syndrome define critical steps in the assembly of the regulatory factor X complex". Mol. Cell. Biol. 20 (12). UNITED STATES: 4455–61. doi:10.1128/MCB.20.12.4455-4461.2000. ISSN 0270-7306. PMC 85813. PMID 10825209.

Further reading

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