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Wikipedia:WikiProject Molecular Biology/Computational Biology/EBI hackathon on September 4, 2015

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About

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This page serves the organization of a hackathon at the European Bioinformatics Institute in Hinxton on September 4, 2015, as a satellite event to the Wikipedia Science Conference held on September 2-3 at the Welcome Trust and the accompanying hackathon on September 5 (both in London).


Potential Topics

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We find the following topics interesting to discuss but if you have any other topics in your mind please add them below.

  • How OA figures could be shared between Europe PMC and Wikipedia
  • How we might co-develop annotation systems
  • Citation counts of Europe PMC in Wikipedia.
  • How to share the outputs of scientific text mining with Wikipedia space e.g. accession number
  • Conversely - how Wikipedia content could be used in scientific resources?
  • Facilitate the addition of bibliographic metadata to Wikidata
    • most of the fields in queries to Citoid, CrossRef and elsewhere can readily be mapped to existing Wikidata properties included in the draft data model for bibliographic metadata for scholarly articles in Wikidata, which would allow to add the information to the respective Wikidata items (or to create those items if need be), e.g. by way of a gadget or through tools like QuickStatements
  • looking up species with Wikidata API [PMR et al.]
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Interested participants

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Please note that if you are from outside the Wellcome Trust Genome Campus, you need to e-mail Senay Kafkas (kafkas@ebi.ac.uk) and let us know more formally that you are coming, so we can notify the campus security to actually let you in.

Venue & Logistics

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  • The Hackathon will take place in the Ickleton room, the EMBL-EBI South Building.
  • How to get to the Wellcome Trust Genome Campus, EMBL-EBI, accommodation etc: http://www.ebi.ac.uk/about/travel
  • When you arrive to the campus, please go to the Security building, which is on your left just before the booths. You will be issued a badge.
  • We will start at 9am and finish at 5pm
  • We have space for up to 20 people.
  • We will provide lunch for the visitors.